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Comment: Create count matrix from multible quant sf files from different directories
by
JG13
• 0
i tried it but this also returns `character(0)`.But I managed to do it in a different way I specify the dir manually , list the files , pr…
Comment: How to compare subset of samples from VCF files
by
Marco
• 0
Yup, thanks James, makes a lot of sense! Not sure why I ended up on that path to expand the VCF or to use `match()` with `VRanges`... Keep …
Comment: Create count matrix from multible quant sf files from different directories
by
James W. MacDonald
66k
``` fls <- dir("^SRX[0-9]+$", "quant.sf", full.names = TRUE) ``` *Edited to add a missing quote*
Comment: Create count matrix from multible quant sf files from different directories
by
JG13
• 0
each SRX* is a directory and inside this directory there is a quant.sf file with the same name. I am confused how to use the files in orde…
Answer: multiple condition issue running DESeq
by
Michael Love
42k
> but I get an error Yes, R functions are strict and with Bioc functions, if the argument expects three things, with the right checks i…
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Answer: How to compare subset of samples from VCF files
Comment: SpliceWiz collateData error
Need help interpreting DexSeq results from plotDEXSeq function
interpreting DEXSeq output
Answer: Input for MAST
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